Table 2.a Summary of estimation for the model for regression of earthwork presence probability on species abundance
(Response here is the count of each species at the different locations.)
| Species | Parameter estimate | 2.5% quantile | 97.5% quantile | |
| Acioa_edulis | -1.09 | -1.35 | -0.83 | |
| Acioa_longipendula | -0.1 | -0.17 | -0.03 | |
| Acrocomia_aculeata | 0.63 | 0.3 | 0.98 | |
| Alibertia_edulis | 0.18 | 0.01 | 0.36 | |
| Anacardium_occidentale | 0.2 | -0.35 | 0.78 | |
| Anadenanthera_peregrina | 0.16 | -0.75 | 1.19 | |
| Annona_montana | 0.65 | 0.34 | 0.97 | |
| Astrocaryum_aculeatum | 0.29 | 0.21 | 0.37 | |
| Astrocaryum_chambira | -0.33 | -0.42 | -0.24 | |
| Astrocaryum_murumuru | 0.73 | 0.7 | 0.76 | |
| Astrocaryum_vulgare | 0.36 | -0.1 | 0.85 | |
| Attalea_maripa | 0.05 | 0 | 0.1 | |
| Attalea_phalerata | 1.45 | 1.4 | 1.5 | |
| Bactris_gasipaes | 1.72 | 1.33 | 2.13 | |
| Bertholletia_excelsa | 0.77 | 0.68 | 0.86 | |
| Bixa_orellana | 0.53 | 0.38 | 0.69 | |
| Brosimum_alicastrum | 1.25 | 1.13 | 1.36 | |
| Byrsonima_crassifolia | 0.1 | -0.71 | 1 | |
| Campomanesia_lineatifolia | 0.36 | -0.14 | 0.9 | |
| Campsiandra_comosa | 0 | -0.07 | 0.07 | |
| Caryocar_brasiliense | 0.51 | -1.31 | 2.8 | |
| Caryocar_glabrum | -0.42 | -0.47 | -0.36 | |
| Caryocar_nuciferum | -0.75 | -1.07 | -0.42 | |
| Caryocar_villosum | -0.05 | -0.17 | 0.08 | |
| Caryodendron_orinocense | 0.09 | -0.05 | 0.24 | |
| Cassia_leiandra | 0.95 | 0.72 | 1.18 | |
| Chrysophyllum_venezuelanense | 0.73 | 0.62 | 0.85 | |
| Couepia_bracteosa | -0.2 | -0.3 | -0.09 | |
| Couepia_subcordata | -0.67 | -0.96 | -0.37 | |
| Couma_utilis | -0.35 | -0.47 | -0.22 | |
| Deguelia_utilis | 0.7 | 0.3 | 1.13 | |
| Dipteryx_odorata | 0.11 | 0.04 | 0.19 | |
| Erisma_japura | -1.7 | -1.89 | -1.53 | |
| Eugenia_stipitata | 0.4 | -0.46 | 1.34 | |
| Eugenia_uniflora | 1.78 | 1.18 | 2.43 | |
| Euterpe_oleracea | 0.33 | 0.3 | 0.35 | |
| Euterpe_precatoria | 0.32 | 0.29 | 0.34 | |
| Garcinia_brasiliensis | 0.57 | 0.44 | 0.7 | |
| Garcinia_macrophylla | 0.19 | 0.12 | 0.26 | |
| Genipa_americana | 0.58 | 0.45 | 0.72 | |
| Grias_neuberthii | -0.26 | -0.35 | -0.18 | |
| Grias_peruviana | -0.51 | -0.87 | -0.13 | |
| Hevea_brasiliensis | 0 | -0.03 | 0.04 | |
| Hymenaea_courbaril | 0.39 | 0.31 | 0.47 | |
| Ilex_guayusa | -1.46 | -3.34 | 0.09 | |
| Inga_cinnamomea | 0.11 | 0 | 0.23 | |
| Inga_edulis | 0.53 | 0.45 | 0.61 | |
| Inga_laurina | 0.44 | 0.3 | 0.57 | |
| Inga_macrophylla | 0.1 | -0.05 | 0.26 | |
| Lecythis_pisonis | 0.1 | 0 | 0.2 | |
| Macoubea_guianensis | -0.54 | -0.68 | -0.39 | |
| Manilkara_elata | -0.14 | -0.2 | -0.07 | |
| Matisia_cordata | 1.51 | 1.41 | 1.61 | |
| Mauritia_flexuosa | -0.14 | -0.18 | -0.11 | |
| Myroxylon_balsamum | 1.32 | 1.14 | 1.51 | |
| Oenocarpus_bacaba | -0.12 | -0.13 | -0.1 | |
| Oenocarpus_bataua | -0.28 | -0.3 | -0.26 | |
| Oenocarpus_distichus | 0.72 | 0.59 | 0.85 | |
| Phytelephas_macrocarpa | 0.31 | -0.76 | 1.53 | |
| Platonia_insignis | 0 | -0.17 | 0.17 | |
| Poraqueiba_paraensis | -1.99 | -3.09 | -1.18 | |
| Poraqueiba_sericea | -1.08 | -1.33 | -0.82 | |
| Pourouma_cecropiifolia | 0.84 | 0.76 | 0.92 | |
| Pouteria_caimito | 0.16 | 0.11 | 0.2 | |
| Pouteria_lucuma | -0.23 | -0.98 | 0.62 | |
| Pouteria_macrocarpa | -0.07 | -0.27 | 0.13 | |
| Pouteria_macrophylla | 0.36 | 0.3 | 0.42 | |
| Pouteria_multiflora | 0.12 | 0.01 | 0.23 | |
| Psidium_acutangulum | -0.13 | -0.29 | 0.04 | |
| Psidium_guineense | 0.63 | -0.51 | 1.91 | |
| Spondias_mombin | 0.42 | 0.37 | 0.47 | |
| Sterculia_excelsa | 0.16 | 0.09 | 0.23 | |
| Talisia_esculenta | 0.98 | 0.57 | 1.4 | |
| Theobroma_bicolor | -0.34 | -0.85 | 0.21 | |
| Theobroma_cacao | 1.4 | 1.35 | 1.45 | |
| Theobroma_grandiflorum | 0.36 | 0.18 | 0.55 | |
| Theobroma_speciosum | 0.7 | 0.65 | 0.75 | |
| Theobroma_subincanum | -0.17 | -0.2 | -0.13 | |
| Trema_micrantha | 1.29 | 1 | 1.6 | |
Table 2.b Summary of estimation for the model for regression of earthwork presence probability on species occurrence
(Response here is the indicator of presence of each species at the different locations.)
| Species | Parameter estimate | 2.5% quantile | 97.5% quantile |
| Acioa_edulis | -0.56 | -1.1 | 0.02 |
| Acioa_longipendula | -0.56 | -0.73 | -0.39 |
| Acrocomia_aculeata | 1.1 | 0.14 | 2.17 |
| Alibertia_edulis | 0.25 | -0.12 | 0.62 |
| Anacardium_occidentale | 0.22 | -0.55 | 1.06 |
| Anadenanthera_peregrina | 0.16 | -1.09 | 1.65 |
| Annona_montana | 0.43 | 0.07 | 0.82 |
| Astrocaryum_aculeatum | 0.43 | 0.24 | 0.62 |
| Astrocaryum_chambira | -0.64 | -0.85 | -0.43 |
| Astrocaryum_murumuru | 0.6 | 0.46 | 0.75 |
| Astrocaryum_vulgare | 0.51 | -0.3 | 1.39 |
| Attalea_maripa | 0.25 | 0.12 | 0.38 |
| Attalea_phalerata | 1.19 | 0.94 | 1.44 |
| Bactris_gasipaes | 1.6 | 1.07 | 2.19 |
| Bertholletia_excelsa | 1.11 | 0.93 | 1.31 |
| Bixa_orellana | 0.65 | 0.35 | 0.97 |
| Brosimum_alicastrum | 1.34 | 1.09 | 1.61 |
| Byrsonima_crassifolia | 0.1 | -0.72 | 1 |
| Campomanesia_lineatifolia | 0.47 | -0.19 | 1.18 |
| Campsiandra_comosa | 0.23 | 0.01 | 0.45 |
| Caryocar_brasiliense | 0.51 | -1.31 | 2.81 |
| Caryocar_glabrum | -0.59 | -0.71 | -0.48 |
| Caryocar_nuciferum | -0.8 | -1.26 | -0.32 |
| Caryocar_villosum | -0.14 | -0.32 | 0.03 |
| Caryodendron_orinocense | 0.15 | -0.16 | 0.47 |
| Cassia_leiandra | 0.91 | 0.48 | 1.36 |
| Chrysophyllum_venezuelanense | 0.52 | 0.32 | 0.72 |
| Couepia_bracteosa | -0.35 | -0.51 | -0.19 |
| Couepia_subcordata | -0.71 | -1.21 | -0.18 |
| Couma_utilis | -0.4 | -0.64 | -0.15 |
| Deguelia_utilis | 0.72 | 0.18 | 1.29 |
| Dipteryx_odorata | -0.03 | -0.15 | 0.1 |
| Erisma_japura | -1.94 | -2.75 | -1.3 |
| Eugenia_stipitata | -0.06 | -1.05 | 1.09 |
| Eugenia_uniflora | 1.58 | 0.8 | 2.46 |
| Euterpe_oleracea | 0.4 | 0.22 | 0.58 |
| Euterpe_precatoria | 0.08 | -0.02 | 0.18 |
| Garcinia_brasiliensis | 0.51 | 0.23 | 0.8 |
| Garcinia_macrophylla | 0.24 | 0.11 | 0.37 |
| Genipa_americana | 0.58 | 0.33 | 0.82 |
| Grias_neuberthii | -0.44 | -0.71 | -0.16 |
| Grias_peruviana | -0.5 | -1.08 | 0.12 |
| Hevea_brasiliensis | 0.64 | 0.51 | 0.77 |
| Hymenaea_courbaril | 0.25 | 0.11 | 0.4 |
| Ilex_guayusa | -1.47 | -3.39 | 0.08 |
| Inga_cinnamomea | 0.02 | -0.19 | 0.23 |
| Inga_edulis | 0.58 | 0.41 | 0.76 |
| Inga_laurina | 0.34 | 0.12 | 0.57 |
| Inga_macrophylla | 0.2 | -0.02 | 0.43 |
| Lecythis_pisonis | 0.04 | -0.11 | 0.2 |
| Macoubea_guianensis | -0.43 | -0.64 | -0.22 |
| Manilkara_elata | -0.14 | -0.27 | -0.01 |
| Matisia_cordata | 1.13 | 0.83 | 1.45 |
| Mauritia_flexuosa | -0.22 | -0.39 | -0.05 |
| Myroxylon_balsamum | 1.35 | 1.05 | 1.67 |
| Oenocarpus_bacaba | -0.43 | -0.54 | -0.33 |
| Oenocarpus_bataua | -0.28 | -0.39 | -0.18 |
| Oenocarpus_distichus | 0.7 | 0.46 | 0.95 |
| Phytelephas_macrocarpa | 0.31 | -0.76 | 1.54 |
| Platonia_insignis | -0.28 | -0.51 | -0.04 |
| Poraqueiba_paraensis | -2.15 | -3.65 | -1.13 |
| Poraqueiba_sericea | -0.98 | -1.35 | -0.62 |
| Pourouma_cecropiifolia | 0.65 | 0.48 | 0.82 |
| Pouteria_caimito | 0.32 | 0.21 | 0.44 |
| Pouteria_lucuma | -0.27 | -1.42 | 1.11 |
| Pouteria_macrocarpa | 0.08 | -0.3 | 0.47 |
| Pouteria_macrophylla | 0.48 | 0.33 | 0.64 |
| Pouteria_multiflora | -0.1 | -0.3 | 0.1 |
| Psidium_acutangulum | 0.59 | 0.23 | 0.96 |
| Psidium_guineense | 0.29 | -1 | 1.8 |
| Spondias_mombin | 0.7 | 0.56 | 0.84 |
| Sterculia_excelsa | 0.04 | -0.09 | 0.18 |
| Talisia_esculenta | 1.08 | 0.39 | 1.83 |
| Theobroma_bicolor | -0.44 | -1.24 | 0.47 |
| Theobroma_cacao | 0.83 | 0.66 | 1.01 |
| Theobroma_grandiflorum | 0.4 | 0.13 | 0.68 |
| Theobroma_speciosum | 0.65 | 0.51 | 0.8 |
| Theobroma_subincanum | -0.38 | -0.49 | -0.28 |
| Trema_micrantha | 0.99 | 0.56 | 1.45 |
